The X509_USER_PROXY environment variable should be set for your Singularity job, the same as with your vanilla job.
You should also see these environment variables set for both types of jobs:
_CONDOR_BIN=/usr/bin
_CONDOR_MACHINE_AD=/var/lib/condor/execute/slot1/dir_19333/.machine.ad
_CONDOR_JOB_IWD=/var/lib/condor/execute/slot1/dir_19333
BATCH_SYSTEM=HTCondor
_CONDOR_JOB_AD=/var/lib/condor/execute/slot1/dir_19333/.job.ad
_CONDOR_SCRATCH_DIR=/var/lib/condor/execute/slot1/dir_19333
Can you check if these are set in your Singularity jobs?
- Jaime
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