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Re: [HTCondor-users] Running over parameter space
- Date: Tue, 01 Dec 2015 21:37:20 +0000
- From: John M Knoeller <johnkn@xxxxxxxxxxx>
- Subject: Re: [HTCondor-users] Running over parameter space
Try running condor_version you appear to be using a version of condor prior to 8.4. (in fact prior to 7.6 I would guess).
-----Original Message-----
From: HTCondor-users [mailto:htcondor-users-bounces@xxxxxxxxxxx] On Behalf Of ap817
Sent: Tuesday, December 1, 2015 3:32 PM
To: HTCondor-Users Mail List <htcondor-users@xxxxxxxxxxx>
Subject: Re: [HTCondor-users] Running over parameter space
I thank you both for your kind assistance. However, this is still a problem. If I have an args.txt with a set of 'a1 a2 a3' and try implementing it via either of the methods suggested, it submits only 1 job. Moreover, right afterward, I check the status only to see that 0 jobs are running. The log file states that the 'Job [is] not properly linked for Condor.' Have you encountered this error before in relation to this?
On 01.12.2015 20:39, Carl Edquist wrote:
> Like Ben mentioned, the new queue syntax in condor 8.4.x makes this a
> lot easier. (But the syntax is slightly different than he described.)
>
> If you have an args.txt with a set of "a1 a2 a3" values on each line
> like:
>
> w1 w2 w3
> x1 x2 x3
> y1 y2 y3
> z1 z2 z3
> ...
> etc,
>
> then you can reference them in your submit file like this:
>
> executable = script.py
> arguments = $(a1) $(a2) $(a3)
>
> queue a1,a2,a3 from args.txt
>
> Or, if you don't care about being able to handle a1,a2,a3 separately,
> you can just set the arguments to be everything on each line:
>
> executable = script.py
>
> queue arguments from args.txt
>
> Carl
>
> On Tue, 1 Dec 2015, ap817 wrote:
>
>> I have begun looking into condor just today and wish to execute some
>> partilar task.
>>
>> I have a python script which contains a function that takes as input
>> three arguments, say a1, a2, a3. I want to use Condor to essentially
>> run over different combinations of these inputs. But I want to do it
>> in such a way that I have some .txt file which has these combinations
>> can be plucked from a matrix according to what combinations I would
>> like to test. How do I implement this in the condor submit file? How
>> do I load files into the submit document? How do I specify these
>> varying arguments using 'arguments' since my arguments cannot be
>> input as macros such as $(Process). I would appreciate any help and
>> particular examples.
>>
>>
>>
>>
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