[HTCondor-users] USER variable in HTCondor

[Labounek René <xlabou01@xxxxxxxxxxxxxxxxxx>]

Dear condor users,
I have a problem with USER variable throuh condor job.
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Here is how my batch.condor file look like:

Executable = /hd1/AnkleStim1_3.ica/condor_log/batch.sh
Universe = vanilla
Output = /hd1/AnkleStim1_3.ica/condor_log/batch.out
Error = /hd1/AnkleStim1_3.ica/condor_log/batch.error
Log   = /hd1/AnkleStim1_3.ica/condor_log/batch.log
Queue
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The /hd1/AnkleStim1_3.ica/condor_log/batch.sh file:

#!/bin/bash
. /etc/fsl/5.0/fsl.sh
cd /md1/NM-RMV/NM-RMV-091/Results/AnkleStim1_3.ica
whoami
echo $USER
USER=pavel
echo $USER
nice -n 10 featregapply ./

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The /hd1/AnkleStim1_3.ica/condor_log/batch.out file:

pavel@emperor:/hd1/AnkleStim1_3.ica/condor_log$ cat batch.out
pavel

pavel
pavel@emperor:/hd1/AnkleStim1_3.ica/condor_log$

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The /hd1/AnkleStim1_3.ica/condor_log/batch.error file:

can't read "env(USER)": no such element in array
    while executing
"set USER       $env(USER)"
    (file "/usr/share/fsl/5.0/tcl/fslstart.tcl" line 6)
    invoked from within
"source $env(FSLDIR)/tcl/fslstart.tcl"
    (file "/usr/lib/fsl/5.0/featregapply" line 81)
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Do you have any ideas, where the problem could be?

Faithfuly,
Rene Labounek