Re: [Condor-users] [galaxy-user] Galaxy-Condor Permission Denied

[Nathan Panike <nwp@xxxxxxxxxxx>]

You might want to ask about this on condor-users@xxxxxxxxxxx, if it is a Condor
problem. (cc'd)

On Tue, Oct 04, 2011 at 04:53:24PM -0500, Oren Livne wrote:
> Dear All,
> 
> I am using Galaxy with condor as the scheduler via the DRMAA Job
> Runner. on Debian 6. Jobs are submitted to COndor but they are held
> because of permissions:
> 
> condor@vm-debian:~$ condor_q -analyze 10.0
> 
> -- Submitter: vm-debian.uchad.uchospitals.edu :
> <165.68.219.43:40312> : vm-debian.uchad.uchospitals.edu
> ---
> 010.000:  Request is held.
> 
> Hold reason: Error from vm-debian.uchad.uchospitals.edu: Failed to
> open '/home/galaxy/galaxy-dist/database/pbs/19.o' as standard
> output: Permission denied (errno 13)
> 
> condor@vm-debian:~$ ls -l /home/galaxy/galaxy-dist/database/pbs/19.o
> -rw-r--r-- 1 galaxy galaxy 0 Oct  4 16:40
> /home/galaxy/galaxy-dist/database/pbs/19.o
> 
> I am running galaxy as the galaxy user. I also have a condor user.
> How to ensure that jobs are submitted as the proper user?

Which user does condor believe you to be?

> Thanks so much,
> Oren