[Condor-users] Shadow Exception

["Fritz, Eric R [AN S]" <ercfrtz@xxxxxxxxxxx>]

Hi all,

When I try to run a job on condor I'm getting the following in the log file that's output:

000 (015.000.000) 02/23 11:49:05 Job submitted from host: <129.186.214.51:1131>
...
001 (015.000.000) 02/23 11:49:08 Job executing on host: <129.186.110.86:1077>
...
007 (015.000.000) 02/23 11:49:08 Shadow exception!
	Error from slot1@xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx: Create_Process(C:\condor\execute\dir_3904\condor_exec.pl,bacteria.genomelist.txt AllGenomesHI.csv, ...) failed: 
	0  -  Run Bytes Sent By Job
	339530  -  Run Bytes Received By Job


Here is my submit file:
# file name: first_program.condor
# Condor submit description file for my_program
Executable = taxonIDreplacer.pl
Universe = vanilla
Error = err.ID.replaced.txt
Output = out.ID.replaced.txt
Log = log.ID.replaced.txt
should_transfer_files = YES
when_to_transfer_output = ON_EXIT
transfer_input_files = bacteria.genomelist.txt,AllGenomesHI.csv
Arguments = bacteria.genomelist.txt AllGenomesHI.csv
Queue

I have all the files to be used in the same directory I'm calling the submit from and from what I have found, everything looks correct to me. What am I doing wrong? Thanks.

-Eric


Eric Fritz
Assistant Scientist II
Iowa State University
2255G Kildee Hall
Ames, IA 50014