Re: [Condor-users] Perl API and current dir problem

["Smithies, Russell" <Russell.Smithies@xxxxxxxxxxxxxxxx>]

Thanx Matt,
I thought there would be something like that but couldn't spot it in the docs.
Now I know what to Google for, it's quite obvious :-)

--Russell

> -----Original Message-----
> From: condor-users-bounces@xxxxxxxxxxx [mailto:condor-users-
> bounces@xxxxxxxxxxx] On Behalf Of Matt Hope
> Sent: Tuesday, 18 August 2009 9:19 p.m.
> To: 'Condor-Users Mail List'
> Subject: Re: [Condor-users] Perl API and current dir problem
> 
> this is provided via an environment variable: _CONDOR_SCRATCH_DIR
> 
> I mess about with things like this within a batch script in my submissions.
> I'm not sure using the following in your arguments:
> 
> Arguments = -t 4 -B 2 -f 2 -D . -d bta_4.2_all %_CONDOR_SCRATCH_DIR%
> Arguments = -t 4 -B 2 -f 2 -D . -d bta_4.2_all ${_CONDOR_SCRATCH_DIR}
> 
> (depending on OS flavour) will work. $ENV(FOO) won't because this is evaluated
> at submission with the submitters environment.
> 
> -----Original Message-----
> From: condor-users-bounces@xxxxxxxxxxx [mailto:condor-users-
> bounces@xxxxxxxxxxx] On Behalf Of Smithies, Russell
> Sent: 18 August 2009 02:36
> To: 'Condor-Users Mail List'
> Subject: [Condor-users] Perl API and current dir problem
> 
> I'm using the Perl API to break up a large file and submit it incrementally to
> individual nodes.
> The problem is how do I get the name of the directory that the job is going to
> run in on the node?
> Eg //node_1/home/condor/execute/dir_29509
> I need to add this as an arg to the executable in the submit file and I can't
> see a way to do it. (passing it "." isn't working)
> 
> Start of my submit file looks lke this:
> 
> 	Executable = /usr/bin/gmap
> 	Universe = vanilla
> 	# args to GMAP
> 	Arguments = -t 4 -B 2 -f 2 -D . -d bta_4.2_all :INPUT_FILE:
> 
> The '-D' param needs to point to be the full path to the current dir.
> 
> Any ideas?
> 
> Thanx,
> 
> 
> Russell Smithies
> 
> Bioinformatics Applications Developer
> T +64 3 489 9085
> E  russell.smithies@xxxxxxxxxxxxxxxx
> 
> Invermay  Research Centre
> Puddle Alley,
> Mosgiel,
> New Zealand
> T  +64 3 489 3809
> F  +64 3 489 9174
> www.agresearch.co.nz
> 
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