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[Condor-users] jobs are being killed after 30-45 minutes
- Date: Mon, 24 Jul 2006 17:02:07 +0100
- From: Santanu Das <santanu@xxxxxxxxxxxxxxxxx>
- Subject: [Condor-users] jobs are being killed after 30-45 minutes
Hi Guys,
A number of jobs are being killed after 30-45 minutes of running on
our site.
An example is job (https://mu3.matrix.sara.nl:9000/yha-
AADzc51_ytdhLM_9Ow) that ran on one of our WNs
(for which then RB reports the following timestamps):
Submitted : Sat Jul 22 21:56:19 2006
Waiting : Sat Jul 22 22:47:46 2006
Ready : Sat Jul 22 21:57:04 2006
Scheduled : Sat Jul 22 21:57:18 2006
Running : Sat Jul 22 21:59:57 2006
Done : Sat Jul 22 22:47:38 2006
Cleared : ---
Aborted : Sat Jul 22 22:47:48 2006
Cancelled : ---
(they are UTC)
Now, on that execute node, StarterLog is pretty normal:
7/22 22:32:59 ******************************************************
7/22 22:32:59 ** condor_starter (CONDOR_STARTER) STARTING UP
7/22 22:32:59 ** /opt/condor-6.6.11/sbin/condor_starter
7/22 22:32:59 ** $CondorVersion: 6.6.11 Mar 23 2006 $
7/22 22:32:59 ** $CondorPlatform: I386-LINUX_RH9 $
7/22 22:32:59 ** PID = 28393
7/22 22:32:59 ******************************************************
7/22 22:32:59 Using config file: /etc/condor/condor_config
7/22 22:32:59 Using local config files: /home/condorr/
condor_config.local
7/22 22:32:59 DaemonCore: Command Socket at <172.24.116.141:9583>
7/22 22:32:59 Done setting resource limits
7/22 22:32:59 Starter communicating with condor_shadow
<172.24.116.151:9685>
7/22 22:32:59 Submitting machine is "serv03--hep--
phy.grid.private.cam.ac.uk"
7/22 22:32:59 VM1_USER set, so running job as condor_user1
7/22 22:32:59 File transfer completed successfully.
7/22 22:33:00 Starting a VANILLA universe job with ID: 5169.0
7/22 22:33:00 IWD: /home/condorr/execute/dir_28393
7/22 22:33:00 Output file: /home/condorr/execute/dir_28393/globus-
cache-export.q10134.batch.out
7/22 22:33:00 Error file: /home/condorr/execute/dir_28393/globus-
cache-export.q10134.batch.err
7/22 22:33:00 Using wrapper /opt/condor/etc/condor_job_wrapper.sh to
exec /home/condorr/execute/dir_28393/condor_exec.exe
7/22 22:33:00 Create_Process succeeded, pid=28395
7/22 22:56:28 passwd_cache::cache_uid(): getpwnam("condor") failed:
Success
7/22 22:56:28 passwd_cache::cache_uid(): getpwnam("condor") failed:
Success
except the last two lines: 7/22 22:56:28 passwd_cache::cache_uid():
getpwnam("condor") failed: Success
This is not an NIS based set up. I don't have a user named "condor"
anywhere but the condor is running as the same user everywhere.
This is what I have in my condor_config.local file on every execute
node:
HEPCAM_CONTINUE = ( $(CPUIdle) && ($(ActivityTimer) > 10) )
CONTINUE = $(HEPCAM_CONTINUE)
KILL = FALSE
PERIODIC_CHECKPOINT = FALSE
PREEMPT = ( (Activity == "Busy") && (State
== "Claimed") && ($(ActivityTimer) > 2160) )
PREEMPTION_RANK = FALSE
PREEMPTION_REQUIREMENTS = FALSE
START = TRUE
SUSPEND = FALSE
WANT_SUSPEND = FALSE
WANT_VACATE = FALSE
SEC_DEFAULT_NEGOTIATION = NEVER
USER_JOB_WRAPPER = /opt/condor/etc/condor_job_wrapper.sh
ShadowLog on the submit host is not so good. I got a lot of theses in
there:
7/23 20:14:58 ******************************************************
7/23 20:14:58 ** condor_shadow (CONDOR_SHADOW) STARTING UP
7/23 20:14:58 ** /opt/condor-6.6.11/sbin/condor_shadow
7/23 20:14:58 ** $CondorVersion: 6.6.11 Mar 23 2006 $
7/23 20:14:58 ** $CondorPlatform: I386-LINUX_RH9 $
7/23 20:14:58 ** PID = 3661
7/23 20:14:58 ******************************************************
7/23 20:14:58 Using config file: /opt/condor/etc/condor_config
7/23 20:14:58 Using local config files: /home/condorr/
condor_config.local
7/23 20:14:58 DaemonCore: Command Socket at <172.24.116.151:9530>
7/23 20:14:59 Initializing a VANILLA shadow
7/23 20:14:59 (7426.0) (3661): Request to run on
<172.24.116.155:9653> was ACCEPTED
7/23 20:14:59 (7462.0) (26192): IO: Failed to read packet header
7/23 20:14:59 (7462.0) (26192): ERROR "Can no longer talk to
condor_starter on execute machine (172.24.116.161)" at line 63 in
file NTreceivers.C
7/23 20:14:59 passwd_cache::cache_uid(): getpwnam("condor") failed:
Success
and this from the StartLog on the respective execute node:
7/23 20:14:59 Starter pid 28113 died on signal 11 (signal 11)
7/23 20:14:59 vm2: State change: starter exited
7/23 20:14:59 vm2: Changing activity: Busy -> Idle
Any idea what's going on? Thanks in advance for your help.
Cheers,
Santanu